Software

InSiliChem is now a well established group with expertise on a variety of computational chemistry methods with interest in fields at the interface between chemistry, biology and medicine. Since 2019, InSiliChem offers its skills in form of services that could help those groups and companies interested in molecular insights on their systems.
Those services include the execution of modeling experiment as well as consulting in aspects like:
- Homology modeling
- protein-ligand dockings and virtual screening
- modeling of catalytic and biocatalytic processes with QM approaches
- Molecular Dynamics (classical and ab initio).
Moreover, the expertise of the group in Python programming and the development of computational tools like GaudiMM can also serve possible clients interested in computational tools dedicated specifically at their problems. In case of being interested, please contact jeandidier.marechal@uab.es.

BioMetAll

BioMetAll is a command-line application for the prediction of metal-binding sites on protein hosts. It also allows recommending amino acid mutations to build a metal-binding site from an incipient motif. Access it here.

GaudiMM

GaudiMM, for Genetic Algorithms with Unrestricted Descriptors for Intuitive Molecular Modeling, helps to sketch new molecular designs that require complex interactions. Access it here.

GPathFinder

GPathFinder is an extension built over GaudiMM core to allow the identification of ligand binding pathways at atomistic level. Access it here.

Garleek: An extra flavor to ONIOM

Garleek (recursive acronym for Garleek is Automated Resources for Layered Energies using External Keyword) allows you to perform QM/MM calculations by interfacing Gaussian with MM programs via its external keyword. Access it here.

Tangram Suite

A collection of molecular modelling tools for UCSF Chimera. Access it here.

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